MolNFT v1 · #10494 · protein

Solution structure of apo-type PLA2 from streptomyces violaceruber a- 2688.

1IT5 · Phospholipase A2: “Solution structure of apo-type PLA2 from streptomyces violaceruber a- 2688.”. Solution nmr, 1 pocket (best druggability 0.44). MolNFT v1 #10494 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1IT5
Type: protein
Length: 122 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phospholipase A2
EC: 3.1.1.4
UniProt: Q6UV28
Pockets: 1 · best druggability 0.44

Structure

solution nmr · 1 distinct chain · 63% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phospholipase A2 (EC 3.1.1.4)	protein	122	63% helix, 0% strand	Q6UV28

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	103	0.44	0.78	18	empty

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1IT5 · Solution structure of apo-type PLA2 from Streptomyces violaceruber A-2688. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6UV28
Elsewhere: RCSB PDB 1IT5 · PDBe 1IT5 · UniProt Q6UV28

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