MolNFT v1 · #104690 · protein
Lytic polysaccharide monooxygenase 9F from neurospora crassa, NCLPMO9F
4QI8: “Lytic polysaccharide monooxygenase 9F from neurospora crassa, NCLPMO9F”. X-ray diffraction, 2 ligands (CU, NO3), 1 pocket (best druggability 0.44). MolNFT v1 #104690 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4QI8
- Type
- protein
- Length
- 428 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lytic polysaccharide monooxygenase
- UniProt
- Q873G1
- Ligands
- CU, NO3
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Lytic polysaccharide monooxygenase | protein | 214 | 5% helix, 32% strand | Q873G1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 141 | 0.44 | 0.76 | 36 | NO3 |
Interfaces
1 interface between chains.
- A–B · 611 Ų buried · 14 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 4QI8 · Lytic polysaccharide monooxygenase 9F from Neurospora crassa, NcLPMO9F · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q873G1
- Elsewhere: RCSB PDB 4QI8 · PDBe 4QI8 · UniProt Q873G1
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.