MolNFT v1 · #104646 · protein
Camelid (llama) nanobody N25 (vhh) against type 6 secretion system tssm protein
4QGY · Nanobody N25, vh domain: “Camelid (llama) nanobody N25 (vhh) against type 6 secretion system tssm protein”. X-ray diffraction. MolNFT v1 #104646 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4QGY
- Type
- protein
- Length
- 261 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nanobody N25, vh domain
Structure
x-ray diffraction · 2 distinct chains · 8% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nanobody N25, vh domain | protein | 135 | 7% helix, 47% strand | — |
| B | Nanobody N25, vh domain | protein | 126 | 10% helix, 48% strand | — |
Interfaces
1 interface between chains.
- A–B · 601 Ų buried · 12 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 4QGY · Camelid (llama) nanobody n25 (VHH) against type 6 secretion system TssM protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4QGY · PDBe 4QGY
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