MolNFT v1 · #104443 · protein
Crystal structure of peptidyl-tRNA hydrolase from pseudomonas aeruginosa at 1.5 ångström resolution
4QAJ: “Crystal structure of peptidyl-tRNA hydrolase from pseudomonas aeruginosa at 1.5 ångström resolution”. X-ray diffraction, 2 pockets (best druggability 0.53). MolNFT v1 #104443 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 4QAJ
- Type
- protein
- Length
- 194 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-tRNA hydrolase
- EC
- 3.1.1.29
- UniProt
- Q9HVC3
- Pockets
- 2 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-tRNA hydrolase (EC 3.1.1.29) | protein | 194 | 45% helix, 21% strand | Q9HVC3 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.53 | 0.81 | 29 | empty |
| 2 | 95 | 0.40 | 0.77 | 25 | empty |
Compared structures
- 4QAJ · Crystal structure of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa at 1.5 Angstrom… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9HVC3 · AlphaFold monomer V2.0 prediction for peptidyl-tRNA hydrolase (Q9HVC3) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HVC3
- Elsewhere: RCSB PDB 4QAJ · PDBe 4QAJ · UniProt Q9HVC3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.