MolNFT v1 · #104400 · protein
Ignar antibody domain C2
4Q9B · Novel antigen receptor: “Ignar antibody domain C2”. X-ray diffraction, 3 pockets (best druggability 0.47). MolNFT v1 #104400 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4Q9B
- Type
- protein
- Length
- 193 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Novel antigen receptor
- UniProt
- Q90544
- Pockets
- 3 · best druggability 0.47
Structure
x-ray diffraction · 2 distinct chains · 12% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Novel antigen receptor | protein | 101 | 11% helix, 51% strand | Q90544 |
| B | Novel antigen receptor | protein | 92 | 13% helix, 51% strand | Q90544 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.47 | 0.74 | 29 | empty |
| 2 | 62 | 0.35 | 0.77 | 15 | empty |
| 3 | 68 | 0.33 | 0.76 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 778 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 4Q9B · IgNAR antibody domain C2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q90544
- Elsewhere: RCSB PDB 4Q9B · PDBe 4Q9B · UniProt Q90544
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.