MolNFT v1 · #104037 · protein

Structure of a putative branched-chain amino acid ABC transporter from chromobacterium violaceum atcc 12472

4PYR: “Structure of a putative branched-chain amino acid ABC transporter from chromobacterium violaceum atcc 12472”. X-ray diffraction, 1 ligand (GSH), 2 pockets (best druggability 0.51). MolNFT v1 #104037 on GenesisL1: 3D structure…

PDB: 4PYR
Type: protein
Length: 299 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative branched-chain amino acid ABC transporter
UniProt: Q7P0B4
Ligands: GSH
Pockets: 2 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative branched-chain amino acid ABC transporter	protein	299	44% helix, 20% strand	Q7P0B4

Ligands and binding sites

GSH · Glutathione · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	219	0.51	0.76	29	GSH
2	117	0.49	0.81	22	empty

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

4PYR · Structure of a putative branched-chain amino acid ABC transporter from Chromobacterium… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7P0B4
Elsewhere: RCSB PDB 4PYR · PDBe 4PYR · UniProt Q7P0B4

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