MolNFT v1 · #103835 · protein
Mycobacterium tuberculosis reca phosphate bound low temperature structure I-lt
4PSK · Protein reca, 1ST part, 2ND part: “Mycobacterium tuberculosis reca phosphate bound low temperature structure I-lt”. X-ray diffraction, 1 ligand (PO4), 4 pockets (best druggability 0.50). MolNFT v1 #103835 on GenesisL1: 3D structure…
- PDB
- 4PSK
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein reca, 1ST part, 2ND part
- EC
- 3.1.-.-
- UniProt
- P0A5U4
- Ligands
- PO4
- Pockets
- 4 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein reca, 1ST part, 2ND part (EC 3.1.-.-) | protein | 308 | 41% helix, 23% strand | P0A5U4 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 185 | 0.50 | 0.77 | 25 | PO4 |
| 2 | 129 | 0.41 | 0.75 | 30 | empty |
| 3 | 107 | 0.36 | 0.74 | 21 | empty |
| 4 | 57 | 0.30 | 0.75 | 15 | empty |
Compared structures
- 4PSK · Mycobacterium tuberculosis RecA phosphate bound low temperature structure I-LT · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A5U4
- Elsewhere: RCSB PDB 4PSK · PDBe 4PSK · UniProt P0A5U4
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