MolNFT v1 · #103749 · protein

Crystal structure of ATCM1 with tyrosine bound in allosteric site

4PPU · Chorismate mutase 1, chloroplastic: “Crystal structure of ATCM1 with tyrosine bound in allosteric site”. X-ray diffraction, 1 ligand (TYR), 2 pockets (best druggability 0.53). MolNFT v1 #103749 on GenesisL1: 3D structure, binding…

PDB: 4PPU
Type: protein
Length: 245 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Chorismate mutase 1, chloroplastic
EC: 5.4.99.5
UniProt: P42738
Ligands: TYR
Pockets: 2 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Chorismate mutase 1, chloroplastic (EC 5.4.99.5)	protein	245	64% helix, 2% strand	P42738

Ligands and binding sites

TYR · Tyrosine · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	199	0.53	0.78	26	empty
2	140	0.43	0.76	31	empty

Compared structures

4PPU · Crystal Structure of AtCM1 with Tyrosine Bound in Allosteric Site · the same entry in another collection · chain A against A, TM-score 1.00
P42738 · AlphaFold monomer V2.0 prediction for chorismate mutase 1, chloroplastic (P42738) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P42738
Elsewhere: RCSB PDB 4PPU · PDBe 4PPU · UniProt P42738

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