MolNFT v1 · #103203 · protein
Structure of the 2,4'-dihydroxyacetophenone dioxygenase from alcaligenes sp.
4P9G: “Structure of the 2,4'-dihydroxyacetophenone dioxygenase from alcaligenes sp.”. X-ray diffraction, 2 ligands (FE, CO3), 1 pocket (best druggability 0.79). MolNFT v1 #103203 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 4P9G
- Type
- protein
- Length
- 150 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 2,4'-dihydroxyacetophenone dioxygenase
- EC
- 1.13.11.41
- UniProt
- Q9REI7
- Ligands
- FE, CO3
- Pockets
- 1 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2,4'-dihydroxyacetophenone dioxygenase (EC 1.13.11.41) | protein | 150 | 15% helix, 44% strand | Q9REI7 |
Ligands and binding sites
- FE · Fe (III) ion · metal · chains A
- CO3 · Carbonate ion · ion · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.79 | 0.99 | 19 | CO3, GOL |
Compared structures
- 4P9G · Structure of the 2,4'-dihydroxyacetophe dioxygenase from Alcaligenes sp. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9REI7
- Elsewhere: RCSB PDB 4P9G · PDBe 4P9G · UniProt Q9REI7
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