MolNFT v1 · #103084 · protein
Structure of CNAG_02591 from cryptococcus neoformans
4P5N · Hypothetical protein CNAG_02591: “Structure of CNAG_02591 from cryptococcus neoformans”. X-ray diffraction, 2 ligands (CD, SO4), 1 pocket (best druggability 0.65). MolNFT v1 #103084 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4P5N
- Type
- protein
- Length
- 148 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein CNAG_02591
- UniProt
- J9VKY2
- Ligands
- CD, SO4
- Pockets
- 1 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Hypothetical protein CNAG_02591 | protein | 74 | 16% helix, 41% strand | J9VKY2 |
Ligands and binding sites
- CD · Cadmium ion · metal · 7 copies · chains A, B
- SO4 · Sulfate ion · ion · 7 copies · chains A, B
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 415 | 0.65 | 0.78 | 50 | SO4, CD |
Interfaces
1 interface between chains.
- A–B · 479 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 4P5N · Structure of CNAG_02591 from Cryptococcus neoformans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9VKY2
- Elsewhere: RCSB PDB 4P5N · PDBe 4P5N · UniProt J9VKY2
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