MolNFT v1 · #103066 · protein
Crystal structure of homoserine kinase from cytophaga hutchinsonii atcc 33406, nysgrc target 032717.
4P52: “Crystal structure of homoserine kinase from cytophaga hutchinsonii atcc 33406, nysgrc target 032717.”. X-ray diffraction, 2 pockets (best druggability 0.67). MolNFT v1 #103066 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 4P52
- Type
- protein
- Length
- 315 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Homoserine kinase
- EC
- 2.7.1.39
- UniProt
- Q11YZ8
- Pockets
- 2 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Homoserine kinase (EC 2.7.1.39) | protein | 315 | 38% helix, 25% strand | Q11YZ8 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 316 | 0.67 | 0.82 | 41 | empty |
| 2 | 59 | 0.28 | 0.73 | 13 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 4P52 · Crystal structure of homoserine kinase from Cytophaga hutchinsonii ATCC 33406, NYSGRC… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q11YZ8
- Elsewhere: RCSB PDB 4P52 · PDBe 4P52 · UniProt Q11YZ8
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