MolNFT v1 · #102928 · protein
Yhde E33A P4 space group
4P0U · Maf-like protein ycef: “Yhde E33A P4 space group”. X-ray diffraction, 4 pockets (best druggability 0.59). MolNFT v1 #102928 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4P0U
- Type
- protein
- Length
- 376 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maf-like protein ycef
- UniProt
- L3WSY9
- Pockets
- 4 · best druggability 0.59
Structure
x-ray diffraction · 2 distinct chains · 42% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maf-like protein ycef | protein | 186 | 41% helix, 26% strand | L3WSY9 |
| B | Maf-like protein ycef | protein | 190 | 43% helix, 25% strand | L3WSY9 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 313 | 0.59 | 0.77 | 35 | empty |
| 2 | 289 | 0.56 | 0.77 | 31 | empty |
| 3 | 68 | 0.37 | 0.78 | 13 | empty |
| 4 | 62 | 0.33 | 0.76 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 1107 Ų buried · 17 hydrogen bonds · protein-protein
Compared structures
- 4P0U · YhdE E33A p4 space group · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L3WSY9
- Elsewhere: RCSB PDB 4P0U · PDBe 4P0U · UniProt L3WSY9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.