MolNFT v1 · #102831 · protein

Crystal structure of cindoxin, surface entropy reduction mutant

4OXX: “Crystal structure of cindoxin, surface entropy reduction mutant”. X-ray diffraction, 1 ligand (FMN), 1 pocket (best druggability 0.39). MolNFT v1 #102831 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4OXX
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cindoxin
UniProt: Q8VQF4
Ligands: FMN
Pockets: 1 · best druggability 0.39

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cindoxin	protein	153	42% helix, 25% strand	Q8VQF4

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	77	0.39	0.78	21	FMN

Compared structures

4OXX · Crystal Structure of Cindoxin, Surface Entropy reduction Mutant · the same entry in another collection · chain A against A, TM-score 1.00
Q8VQF4 · AlphaFold monomer V2.0 prediction for cindoxin (Q8VQF4) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8VQF4
Elsewhere: RCSB PDB 4OXX · PDBe 4OXX · UniProt Q8VQF4

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