GL1X · GenesisL1 explorer

MolNFT v1 · #102814 · protein

Structure of synechococcus elongatus pcc 7942 CCMK2

4OX7 · Carbon dioxide-concentrating mechanism protein ccmk: “Structure of synechococcus elongatus pcc 7942 CCMK2”. X-ray diffraction, 1 pocket (best druggability 0.47). MolNFT v1 #102814 on GenesisL1: 3D structure, binding sites and…

PDB
4OX7
Type
protein
Length
606 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Carbon dioxide-concentrating mechanism protein ccmk
UniProt
Q03511
Pockets
1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 33% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D, E, FCarbon dioxide-concentrating mechanism protein ccmkprotein10138% helix, 33% strandQ03511

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12360.470.7324empty

Interfaces

6 interfaces between chains.

  • A–F · 1144 Ų buried · 12 hydrogen bonds · protein-protein
  • D–E · 1140 Ų buried · 12 hydrogen bonds · protein-protein
  • B–C · 1134 Ų buried · 10 hydrogen bonds · protein-protein
  • A–B · 1134 Ų buried · 12 hydrogen bonds · protein-protein
  • E–F · 1134 Ų buried · 11 hydrogen bonds · protein-protein

Compared structures

  • 4OX7 · Structure of Synechococcus elongatus PCC 7942 CcmK2 · the same entry in another collection · chain F against F, TM-score 1.00
  • Q03511 · AlphaFold monomer V2.0 prediction for carboxysome shell protein CCMK2 (Q03511) · a predicted model of the same protein · chain D against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.