MolNFT v1 · #102684 · protein
X-structure of a variant of ncr from zymomonas mobilis
4OT7 · NADH:FLAVIN OXIDOREDUCTASE/NADH oxidase: “X-structure of a variant of ncr from zymomonas mobilis”. X-ray diffraction, 2 ligands (FMN, CL), 3 pockets (best druggability 0.69). MolNFT v1 #102684 on GenesisL1: 3D structure, binding…
- PDB
- 4OT7
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- NADH:FLAVIN OXIDOREDUCTASE/NADH oxidase
- UniProt
- Q5NLA1
- Ligands
- FMN, CL
- Pockets
- 3 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 36% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NADH:FLAVIN OXIDOREDUCTASE/NADH oxidase | protein | 308 | 36% helix, 16% strand | Q5NLA1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.69 | 0.82 | 48 | FMN, CL |
| 2 | 102 | 0.39 | 0.76 | 18 | CL |
| 3 | 93 | 0.35 | 0.74 | 19 | empty |
Compared structures
- 4OT7 · X-structure of a variant of NCR from zymomonas mobilis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NLA1
- Elsewhere: RCSB PDB 4OT7 · PDBe 4OT7 · UniProt Q5NLA1
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