MolNFT v1 · #102554 · protein
AA13 lytic polysaccharide monooxygenase from aspergillus oryzae
4OPB · Predicted protein: “AA13 lytic polysaccharide monooxygenase from aspergillus oryzae”. X-ray diffraction, 3 ligands (NAG, ZN, CU). MolNFT v1 #102554 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4OPB
- Type
- protein
- Length
- 233 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Predicted protein
- UniProt
- Q2U8Y3
- Ligands
- NAG, ZN, CU
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Predicted protein | protein | 233 | 16% helix, 28% strand | Q2U8Y3 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- ZN · Zinc ion · metal · 4 copies · chains A
- CU · Copper (II) ion · metal · chains A
- GOL · Glycerol · additive · 7 copies · chains A
- IPA · Isopropyl alcohol · additive · 2 copies · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 7 disulfide, 1 glycan, 1 modified (disulfide, N-glycosylation, methylation).
Compared structures
- 4OPB · AA13 Lytic polysaccharide monooxygenase from Aspergillus oryzae · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2U8Y3
- Elsewhere: RCSB PDB 4OPB · PDBe 4OPB · UniProt Q2U8Y3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.