MolNFT v1 · #102350 · protein

The crystal structure of V84P mutant of S. solfataricus acylphosphatase

4OJ3: “The crystal structure of V84P mutant of S. solfataricus acylphosphatase”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #102350 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4OJ3
Type: protein
Length: 185 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Acylphosphatase
EC: 3.6.1.7
UniProt: Q97ZL0
Ligands: SO4

Structure

x-ray diffraction · 2 distinct chains · 28% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Acylphosphatase (EC 3.6.1.7)	protein	90	27% helix, 42% strand	Q97ZL0
B	Acylphosphatase (EC 3.6.1.7)	protein	95	29% helix, 40% strand	Q97ZL0

Ligands and binding sites

SO4 · Sulfate ion · ion · 4 copies · chains A, B
GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 435 Å² buried · 15 hydrogen bonds · protein-protein

Compared structures

4OJ3 · The crystal structure of V84P mutant of S. solfataricus Acylphosphatase · the same entry in another collection · chain A against A, TM-score 1.00
Q97ZL0 · AlphaFold monomer V2.0 prediction for acylphosphatase (Q97ZL0) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97ZL0
Elsewhere: RCSB PDB 4OJ3 · PDBe 4OJ3 · UniProt Q97ZL0

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