MolNFT v1 · #10217 · protein

Crystal structure of the uncomplexed pelle death domain

1IK7 · Probable SERINE/THREONINE-protein kinase pelle: “Crystal structure of the uncomplexed pelle death domain”. X-ray diffraction. MolNFT v1 #10217 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1IK7
Type: protein
Length: 101 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable SERINE/THREONINE-protein kinase pelle
EC: 2.7.1.37
UniProt: Q05652

Structure

x-ray diffraction · 2 distinct chains · 95% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable SERINE/THREONINE-protein kinase pelle (EC 2.7.1.37)	protein	52	94% helix, 0% strand	Q05652
B	Probable SERINE/THREONINE-protein kinase pelle (EC 2.7.1.37)	protein	49	96% helix, 0% strand	Q05652

Ligands and binding sites

TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 4 copies · chains A, B
MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 877 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

1IK7 · Crystal Structure of the Uncomplexed Pelle Death Domain · the same entry in another collection · chain A against A, TM-score 1.00
Q05652 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase pelle (Q05652) · a predicted model of the same protein · chain B against A, TM-score 0.46

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q05652
Elsewhere: RCSB PDB 1IK7 · PDBe 1IK7 · UniProt Q05652

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