MolNFT v1 · #101966 · protein

Crystal structure of carg

4O7J: “Crystal structure of carg”. X-ray diffraction, 1 ligand (NA), 5 pockets (best druggability 0.40). MolNFT v1 #101966 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4O7J
Type: protein
Length: 315 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Carg
Ligands: NA
Pockets: 5 · best druggability 0.40

Structure

x-ray diffraction · 2 distinct chains · 7% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Carg	protein	158	7% helix, 42% strand	—
A	Carg	protein	157	7% helix, 44% strand	—

Ligands and binding sites

NA · Sodium ion · metal · 2 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	91	0.40	0.77	15	empty
2	93	0.39	0.77	18	empty
3	66	0.32	0.75	15	empty
4	56	0.31	0.76	17	empty
5	54	0.26	0.73	17	empty

Interfaces

1 interface between chains.

B–A · 1366 Å² buried · 31 hydrogen bonds · protein-protein

Compared structures

4O7J · Crystal structure of CarG · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4O7J · PDBe 4O7J

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