MolNFT v1 · #101901 · protein

Crystal structure of an uncharacterized protein from pseudomonas aeruginosa

4O5P: “Crystal structure of an uncharacterized protein from pseudomonas aeruginosa”. X-ray diffraction, 20 pockets (best druggability 0.77). MolNFT v1 #101901 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4O5P
Type: protein
Length: 1,483 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein
UniProt: Q9HYV3
Pockets: 20 · best druggability 0.77

Structure

x-ray diffraction · 2 distinct chains · 42% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein	protein	742	43% helix, 20% strand	Q9HYV3
B	Uncharacterized protein	protein	741	42% helix, 19% strand	Q9HYV3

Pockets

20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1159	0.77	0.79	93	empty
2	882	0.74	0.79	58	empty
3	495	0.66	0.78	62	empty
4	485	0.65	0.78	56	empty
5	391	0.59	0.76	43	empty

Interfaces

1 interface between chains.

A–B · 334 Å² buried · 1 hydrogen bond · protein-protein

Modifications

Observed in the structure: 28 modified, 1 disulfide (engineered, disulfide).

Compared structures

4O5P · Crystal structure of an uncharacterized protein from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HYV3
Elsewhere: RCSB PDB 4O5P · PDBe 4O5P · UniProt Q9HYV3

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