MolNFT v1 · #101887 · protein
The crystal structure of a laci family transcriptional regulator from bifidobacterium animalis subsp. lactis dsm 10140
4O5A · Laci family transcription regulator: “The crystal structure of a laci family transcriptional regulator from bifidobacterium animalis subsp. lactis…”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.70). MolNFT v1…
- PDB
- 4O5A
- Type
- protein
- Length
- 271 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Laci family transcription regulator
- UniProt
- C6AGK7
- Ligands
- SO4
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Laci family transcription regulator | protein | 271 | 42% helix, 21% strand | C6AGK7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 536 | 0.70 | 0.79 | 56 | empty |
Modifications
Observed in the structure: 12 modified (engineered, oxidation).
Compared structures
- 4O5A · The crystal structure of a LacI family transcriptional regulator from Bifidobacterium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C6AGK7
- Elsewhere: RCSB PDB 4O5A · PDBe 4O5A · UniProt C6AGK7
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