MolNFT v1 · #101286 · protein
Crystal structure of the apo ectoine hydroxylase ectd from salibacillus salexigens
4NMI: “Crystal structure of the apo ectoine hydroxylase ectd from salibacillus salexigens”. X-ray diffraction, 2 pockets (best druggability 0.75). MolNFT v1 #101286 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4NMI
- Type
- protein
- Length
- 280 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ectd
- EC
- 1.14.11.-
- UniProt
- Q2TDY4
- Pockets
- 2 · best druggability 0.75
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ectd (EC 1.14.11.-) | protein | 280 | 29% helix, 22% strand | Q2TDY4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 441 | 0.75 | 0.85 | 50 | empty |
| 2 | 97 | 0.43 | 0.78 | 19 | empty |
Compared structures
- 4NMI · Crystal Structure of the Apo ectoine hydroxylase ECTD from Salibacillus salexigens · the same entry in another collection · chain A against A, TM-score 1.00
- Q2TDY4 · AlphaFold monomer V2.0 prediction for ectoine dioxygenase (Q2TDY4) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2TDY4
- Elsewhere: RCSB PDB 4NMI · PDBe 4NMI · UniProt Q2TDY4
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