MolNFT v1 · #100483 · protein
Structure of a class 2 docking domain complex from modules curg and curh of the curacin a polyketide synthase
4MYY · Curg, curh fusion protein: “Structure of a class 2 docking domain complex from modules curg and curh of the curacin a polyketide synthase”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.38). MolNFT v1 #100483 on…
- PDB
- 4MYY
- Type
- protein
- Length
- 163 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Curg, curh fusion protein
- UniProt
- F4Y429, F4Y428
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.38
Structure
x-ray diffraction · 2 distinct chains · 80% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Curg, curh fusion protein | protein | 79 | 80% helix, 0% strand | F4Y429, F4Y428 |
| B | Curg, curh fusion protein | protein | 84 | 81% helix, 0% strand | F4Y429, F4Y428 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.38 | 0.76 | 14 | empty |
| 2 | 59 | 0.33 | 0.76 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 1870 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 4MYY · Structure of a class 2 docking domain complex from modules CurG and CurH of the curacin A… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F4Y429
- Every structure of UniProt F4Y428
- Elsewhere: RCSB PDB 4MYY · PDBe 4MYY · UniProt F4Y429 · UniProt F4Y428
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