MolNFT v1 · #100436 · protein

X-ray structure of FE(II)-ZNPIXFEBMB1

4MXK · Myoglobin: “X-ray structure of FE(II)-ZNPIXFEBMB1”. X-ray diffraction, 2 ligands (ZNH, FE2), 1 pocket (best druggability 0.70). MolNFT v1 #100436 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4MXK
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Myoglobin
UniProt: P02185
Ligands: ZNH, FE2
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Myoglobin	protein	153	78% helix, 0% strand	P02185

Ligands and binding sites

ZNH · Protoporphyrin IX containing Zn · ligand · chains A
FE2 · Fe (II) ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	226	0.70	0.86	28	ZNH

Compared structures

4MXK · X-ray structure of Fe(II)-ZnPIXFeBMb1 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02185
Elsewhere: RCSB PDB 4MXK · PDBe 4MXK · UniProt P02185

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