MolNFT v1 · #100168 · protein

Crystal structure of the chitin-binding module (CBM18) of a chitinase- like protein from hevea brasiliensis

4MPI · Class I chitinase: “Crystal structure of the chitin-binding module (CBM18) of a chitinase- like protein from hevea brasiliensis”. X-ray diffraction. MolNFT v1 #100168 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4MPI
Type: protein
Length: 89 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Class I chitinase
UniProt: Q8GUD7

Structure

x-ray diffraction · 2 distinct chains · 19% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Class I chitinase	protein	44	23% helix, 20% strand	Q8GUD7
B	Class I chitinase	protein	45	16% helix, 20% strand	Q8GUD7

Ligands and binding sites

MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A, B
DIO · 1,4-diethylene dioxide · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 433 Å² buried · 6 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

4MPI · Crystal structure of the chitin-binding module (CBM18) of a chitinase-like protein from… · the same entry in another collection · chain A against A, TM-score 1.00
Q8GUD7 · AlphaFold monomer V2.0 prediction for probable inactive chitinase- like protein lacic… · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8GUD7
Elsewhere: RCSB PDB 4MPI · PDBe 4MPI · UniProt Q8GUD7

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.