MolNFT v1 · #100125 · protein
Crystal structure of superantigen pfit
4MO7 · Transcriptional regulator I2: “Crystal structure of superantigen pfit”. X-ray diffraction, 1 ligand (MG), 2 pockets (best druggability 0.54). MolNFT v1 #100125 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4MO7
- Type
- protein
- Length
- 188 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator I2
- UniProt
- I2BPL4
- Ligands
- MG
- Pockets
- 2 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator I2 | protein | 188 | 76% helix, 0% strand | I2BPL4 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 217 | 0.54 | 0.77 | 24 | empty |
| 2 | 71 | 0.39 | 0.79 | 17 | empty |
Modifications
Observed in the structure: 1 modified (artifact).
Compared structures
- 4MO7 · Crystal structure of superantigen PfiT · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I2BPL4
- Elsewhere: RCSB PDB 4MO7 · PDBe 4MO7 · UniProt I2BPL4
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