MolNFT v1 · #539336 · protein

AlphaFold monomer V2.0 prediction for uncharacterized hth-type transcriptional regulator yydk (Q45591)

Q45591: “AlphaFold monomer V2.0 prediction for uncharacterized hth-type transcriptional regulator yydk (Q45591)”. 2 pockets (best druggability 0.73). MolNFT v1 #539336 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q45591
Type: protein
Length: 236 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xc672026d403F8F9B1631F769bF343e5571d0Bdf3
Molecule: Uncharacterized hth-type transcriptional regulator yydk
UniProt: Q45591
Pockets: 2 · best druggability 0.73

Structure

1 distinct chain · 26% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized hth-type transcriptional regulator yydk	protein	236	26% helix, 34% strand	Q45591

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	174	0.73	0.90	37	empty
2	467	0.69	0.80	43	empty

Compared structures

3BWG · The crystal structure of possible transcriptional regulator yydk from bacillus subtilis… · an experimental structure of the same protein · chain A against A, TM-score 0.91
3BWG · The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis… · an experimental structure of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q45591
Elsewhere: UniProt Q45591 · AlphaFold DB Q45591

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