MolNFT v1 · #539023 · protein

AlphaFold monomer V2.0 prediction for GTP pyrophosphokinase ywac (P39583)

P39583: “AlphaFold monomer V2.0 prediction for GTP pyrophosphokinase ywac (P39583)”. 1 pocket (best druggability 0.49). MolNFT v1 #539023 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P39583
Type: protein
Length: 210 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xFa872453622BC4f6676d177663b60596b0BD4b6d
Molecule: GTP pyrophosphokinase ywac
UniProt: P39583
Pockets: 1 · best druggability 0.49

Structure

1 distinct chain · 57% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	GTP pyrophosphokinase ywac	protein	210	57% helix, 20% strand	P39583

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	232	0.49	0.75	27	empty

Compared structures

6FGK · Crystal structure of the small alarmone synthethase 2 from Bacillus subtilis · an experimental structure of the same protein · chain A against D, TM-score 0.86
6FGK · Crystal structure of the small alarmone synthethase 2 from bacillus subtilis · an experimental structure of the same protein · chain A against D, TM-score 0.86

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P39583
Elsewhere: UniProt P39583 · AlphaFold DB P39583

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