MolNFT v1 · #538615 · protein
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (B2B5V0)
B2B5V0: “AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (B2B5V0)”. 6 pockets (best druggability 0.81). MolNFT v1 #538615 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B2B5V0
- Type
- protein
- Length
- 487 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9e5E98E011361C5888c92e2CDb7652E02Bd5C7Ed
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- B2B5V0
- Pockets
- 6 · best druggability 0.81
Structure
1 distinct chain · 11% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 487 | 11% helix, 42% strand | B2B5V0 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 684 | 0.81 | 0.85 | 57 | empty |
| 2 | 321 | 0.61 | 0.79 | 42 | empty |
| 3 | 134 | 0.40 | 0.75 | 25 | empty |
| 4 | 51 | 0.36 | 0.80 | 16 | empty |
| 5 | 56 | 0.35 | 0.79 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2B5V0
- Elsewhere: UniProt B2B5V0 · AlphaFold DB B2B5V0
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