MolNFT v1 · #538607 · protein
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (A5DST9)
A5DST9: “AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (A5DST9)”. 8 pockets (best druggability 0.80). MolNFT v1 #538607 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5DST9
- Type
- protein
- Length
- 491 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- A5DST9
- Pockets
- 8 · best druggability 0.80
Structure
1 distinct chain · 12% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 491 | 12% helix, 40% strand | A5DST9 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 806 | 0.80 | 0.83 | 59 | empty |
| 2 | 299 | 0.61 | 0.79 | 28 | empty |
| 3 | 175 | 0.57 | 0.81 | 18 | empty |
| 4 | 66 | 0.51 | 0.86 | 15 | empty |
| 5 | 196 | 0.47 | 0.75 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5DST9
- Elsewhere: UniProt A5DST9 · AlphaFold DB A5DST9
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