MolNFT v1 · #538590 · protein
AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q4WP10)
Q4WP10: “AlphaFold monomer V2.0 prediction for ribosome biogenesis protein YTM1 (Q4WP10)”. 7 pockets (best druggability 0.80). MolNFT v1 #538590 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q4WP10
- Type
- protein
- Length
- 488 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x38D04c47F82B1C99B688f0982E0019601dc7Fc42
- Molecule
- Ribosome biogenesis protein YTM1
- UniProt
- Q4WP10
- Pockets
- 7 · best druggability 0.80
Structure
1 distinct chain · 10% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein YTM1 | protein | 488 | 10% helix, 44% strand | Q4WP10 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 698 | 0.80 | 0.84 | 55 | empty |
| 2 | 283 | 0.67 | 0.83 | 36 | empty |
| 3 | 144 | 0.44 | 0.76 | 26 | empty |
| 4 | 57 | 0.35 | 0.78 | 15 | empty |
| 5 | 78 | 0.31 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4WP10
- Elsewhere: UniProt Q4WP10 · AlphaFold DB Q4WP10
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