MolNFT v1 · #536687 · protein
AlphaFold monomer V2.0 prediction for uncharacterized ATP-dependent helicase ypra (P50830)
P50830: “AlphaFold monomer V2.0 prediction for uncharacterized ATP-dependent helicase ypra (P50830)”. 6 pockets (best druggability 0.73). MolNFT v1 #536687 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P50830
- Type
- protein
- Length
- 749 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Uncharacterized ATP-dependent helicase ypra
- UniProt
- P50830
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 38% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized ATP-dependent helicase ypra | protein | 749 | 38% helix, 26% strand | P50830 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 702 | 0.73 | 0.79 | 72 | empty |
| 2 | 886 | 0.72 | 0.77 | 110 | empty |
| 3 | 275 | 0.51 | 0.74 | 33 | empty |
| 4 | 58 | 0.37 | 0.79 | 15 | empty |
| 5 | 50 | 0.29 | 0.76 | 13 | empty |
Compared structures
- 6ZNQ · Crystal Structure of DUF1998 helicase MrfA bound to DNA and AMPPNP · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 6ZNQ · Crystal structure of DUF1998 helicase mrfa bound to DNA and amppnp · an experimental structure of the same protein · chain A against A, TM-score 0.82
- 6ZNP · Crystal structure of DUF1998 helicase mrfa bound to DNA · an experimental structure of the same protein · chain A against A, TM-score 0.81
- 6ZNS · Crystal structure of DUF1998 helicase mrfa · an experimental structure of the same protein · chain A against A, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50830
- Elsewhere: UniProt P50830 · AlphaFold DB P50830
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.