MolNFT v1 · #534639 · protein
AlphaFold monomer V2.0 prediction for ATP-dependent zinc metalloprotease YME1 homolog (P54813)
P54813: “AlphaFold monomer V2.0 prediction for ATP-dependent zinc metalloprotease YME1 homolog (P54813)”. 6 pockets (best druggability 0.63). MolNFT v1 #534639 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P54813
- Type
- protein
- Length
- 723 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- ATP-dependent zinc metalloprotease YME1 homolog
- UniProt
- P54813
- Pockets
- 6 · best druggability 0.63
Structure
1 distinct chain · 50% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent zinc metalloprotease YME1 homolog | protein | 723 | 50% helix, 8% strand | P54813 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 509 | 0.63 | 0.76 | 50 | empty |
| 2 | 271 | 0.57 | 0.77 | 25 | empty |
| 3 | 271 | 0.48 | 0.73 | 31 | empty |
| 4 | 87 | 0.47 | 0.81 | 26 | empty |
| 5 | 112 | 0.45 | 0.79 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54813
- Elsewhere: UniProt P54813 · AlphaFold DB P54813
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