MolNFT v1 · #530503 · protein
AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A5F5F3)
A5F5F3: “AlphaFold monomer V2.0 prediction for tRNA-modifying protein ygfz (A5F5F3)”. 4 pockets (best druggability 0.57). MolNFT v1 #530503 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A5F5F3
- Type
- protein
- Length
- 323 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDf98f0B7d0aFf82D92aF3C05EdA27B95a8455716
- Molecule
- TRNA-modifying protein ygfz
- UniProt
- A5F5F3
- Pockets
- 4 · best druggability 0.57
Structure
1 distinct chain · 22% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TRNA-modifying protein ygfz | protein | 323 | 22% helix, 36% strand | A5F5F3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 367 | 0.57 | 0.75 | 43 | empty |
| 2 | 131 | 0.38 | 0.73 | 24 | empty |
| 3 | 81 | 0.33 | 0.75 | 13 | empty |
| 4 | 64 | 0.30 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5F5F3
- Elsewhere: UniProt A5F5F3 · AlphaFold DB A5F5F3
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