MolNFT v1 · #530257 · protein
AlphaFold monomer V2.0 prediction for uncharacterized vacuolar membrane protein YGR125W (P53273)
P53273: “AlphaFold monomer V2.0 prediction for uncharacterized vacuolar membrane protein YGR125W (P53273)”. 12 pockets (best druggability 0.79). MolNFT v1 #530257 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P53273
- Type
- protein
- Length
- 1,036 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e9272eA74C368dd3e84cE9A548B8C44a833C74C
- Molecule
- Uncharacterized vacuolar membrane protein YGR125W
- UniProt
- P53273
- Pockets
- 12 · best druggability 0.79
Structure
1 distinct chain · 54% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized vacuolar membrane protein YGR125W | protein | 1036 | 54% helix, 9% strand | P53273 |
Pockets
12 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 992 | 0.79 | 0.81 | 61 | empty |
| 2 | 65 | 0.71 | 0.97 | 30 | empty |
| 3 | 426 | 0.65 | 0.78 | 41 | empty |
| 4 | 221 | 0.63 | 0.82 | 24 | empty |
| 5 | 133 | 0.59 | 0.83 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53273
- Elsewhere: UniProt P53273 · AlphaFold DB P53273
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