MolNFT v1 · #530205 · protein

AlphaFold monomer V2.0 prediction for transposon TY1-GR2 gag-pol polyprotein (Q12269)

Q12269: “AlphaFold monomer V2.0 prediction for transposon TY1-GR2 gag-pol polyprotein (Q12269)”. 16 pockets (best druggability 0.82). MolNFT v1 #530205 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: Q12269
Type: protein
Length: 1,755 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xA32Fdfbad4dfbdC07f57d6Aa6C5862EDA88D0Ec3
Molecule: Transposon TY1-GR2 gag-pol polyprotein
UniProt: Q12269
Pockets: 16 · best druggability 0.82

Structure

1 distinct chain · 27% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transposon TY1-GR2 gag-pol polyprotein	protein	1755	27% helix, 14% strand	Q12269

Pockets

16 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	852	0.82	0.84	119	empty
2	1069	0.76	0.78	74	empty
3	957	0.76	0.78	79	empty
4	255	0.74	0.87	36	empty
5	488	0.66	0.78	52	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12269
Elsewhere: UniProt Q12269 · AlphaFold DB Q12269

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