MolNFT v1 · #529442 · protein
AlphaFold monomer V2.0 prediction for protein yellow (P62408)
P62408: “AlphaFold monomer V2.0 prediction for protein yellow (P62408)”. 5 pockets (best druggability 0.71). MolNFT v1 #529442 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P62408
- Type
- protein
- Length
- 541 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdea97E99844b58cF6fa397C1628023B21706eb6e
- Molecule
- Protein yellow
- UniProt
- P62408
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 11% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein yellow | protein | 541 | 11% helix, 28% strand | P62408 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 237 | 0.71 | 0.86 | 31 | empty |
| 2 | 531 | 0.67 | 0.78 | 45 | empty |
| 3 | 158 | 0.59 | 0.83 | 28 | empty |
| 4 | 140 | 0.47 | 0.78 | 19 | empty |
| 5 | 144 | 0.39 | 0.73 | 28 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62408
- Elsewhere: UniProt P62408 · AlphaFold DB P62408
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