MolNFT v1 · #525790 · protein
AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B5YSD8)
B5YSD8: “AlphaFold monomer V2.0 prediction for putative transport protein ybjl (B5YSD8)”. 6 pockets (best druggability 0.78). MolNFT v1 #525790 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B5YSD8
- Type
- protein
- Length
- 561 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Putative transport protein ybjl
- UniProt
- B5YSD8
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 62% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transport protein ybjl | protein | 561 | 62% helix, 12% strand | B5YSD8 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1149 | 0.78 | 0.79 | 96 | empty |
| 2 | 126 | 0.59 | 0.85 | 26 | empty |
| 3 | 161 | 0.56 | 0.81 | 22 | empty |
| 4 | 116 | 0.49 | 0.80 | 14 | empty |
| 5 | 130 | 0.46 | 0.77 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YSD8
- Elsewhere: UniProt B5YSD8 · AlphaFold DB B5YSD8
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