MolNFT v1 · #525738 · protein
AlphaFold monomer V2.0 prediction for probable L,D-transpeptidase ybis (P0AAY0)
P0AAY0: “AlphaFold monomer V2.0 prediction for probable L,D-transpeptidase ybis (P0AAY0)”. 4 pockets (best druggability 0.60). MolNFT v1 #525738 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0AAY0
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb0eE012d633aaaddC45C81d2C278B0cA4d9F1ec5
- Molecule
- Probable L,D-transpeptidase ybis
- UniProt
- P0AAY0
- Pockets
- 4 · best druggability 0.60
Structure
1 distinct chain · 18% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable L,D-transpeptidase ybis | protein | 306 | 18% helix, 24% strand | P0AAY0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 241 | 0.60 | 0.80 | 28 | empty |
| 2 | 227 | 0.54 | 0.77 | 21 | empty |
| 3 | 54 | 0.33 | 0.77 | 20 | empty |
| 4 | 58 | 0.28 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AAY0
- Elsewhere: UniProt P0AAY0 · AlphaFold DB P0AAY0
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