MolNFT v1 · #518669 · protein
AlphaFold monomer V2.0 prediction for probable amino-acid ABC transporter periplasmic-binding protein Y4OP (P55601)
P55601: “AlphaFold monomer V2.0 prediction for probable amino-acid ABC transporter periplasmic-binding protein Y4OP…”. 3 pockets (best druggability 0.66). MolNFT v1 #518669 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P55601
- Type
- protein
- Length
- 431 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x460E4e7A7290a39D7Ba2ae71B7B7CEa0ecE29BeC
- Molecule
- Probable amino-acid ABC transporter periplasmic-binding protein Y4OP
- UniProt
- P55601
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 48% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable amino-acid ABC transporter periplasmic-binding protein Y4OP | protein | 431 | 48% helix, 14% strand | P55601 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.66 | 0.86 | 26 | empty |
| 2 | 69 | 0.45 | 0.83 | 24 | empty |
| 3 | 61 | 0.37 | 0.79 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55601
- Elsewhere: UniProt P55601 · AlphaFold DB P55601
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