MolNFT v1 · #507336 · protein

AlphaFold monomer V2.0 prediction for degv domain-containing protein SPY_1493/M5005_SPY1226 (P67372)

P67372: “AlphaFold monomer V2.0 prediction for degv domain-containing protein SPY_1493/M5005_SPY1226 (P67372)”. 3 pockets (best druggability 0.77). MolNFT v1 #507336 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession: P67372
Type: protein
Length: 279 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x08ad39f825B51ca1919f322E73E81839001eD55C
Molecule: Degv domain-containing protein SPY_1493/M5005_SPY1226
UniProt: P67372
Pockets: 3 · best druggability 0.77

Structure

1 distinct chain · 40% helix, 27% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Degv domain-containing protein SPY_1493/M5005_SPY1226	protein	279	40% helix, 27% strand	P67372

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	111	0.77	0.96	30	empty
2	104	0.46	0.80	21	empty
3	52	0.26	0.73	18	empty

Compared structures

2G7Z · Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds… · an experimental structure of the same protein · chain A against A, TM-score 0.98
2G7Z · Conserved degv-like protein of unknown function from streptococcus pyogenes M1 gas binds… · an experimental structure of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P67372
Elsewhere: UniProt P67372 · AlphaFold DB P67372

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