MolNFT v1 · #505762 · protein
AlphaFold monomer V2.0 prediction for uncharacterized RNA methyltransferase SPYM3_1299 (P0DG16)
P0DG16: “AlphaFold monomer V2.0 prediction for uncharacterized RNA methyltransferase SPYM3_1299 (P0DG16)”. 5 pockets (best druggability 0.71). MolNFT v1 #505762 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DG16
- Type
- protein
- Length
- 451 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- Uncharacterized RNA methyltransferase SPYM3_1299
- UniProt
- P0DG16
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 24% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized RNA methyltransferase SPYM3_1299 | protein | 451 | 24% helix, 35% strand | P0DG16 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 742 | 0.71 | 0.77 | 87 | empty |
| 2 | 166 | 0.46 | 0.76 | 23 | empty |
| 3 | 70 | 0.37 | 0.77 | 11 | empty |
| 4 | 84 | 0.37 | 0.76 | 15 | empty |
| 5 | 76 | 0.30 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DG16
- Elsewhere: UniProt P0DG16 · AlphaFold DB P0DG16
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