MolNFT v1 · #502583 · protein
AlphaFold monomer V2.0 prediction for xylitol-binding protein (A0QYB3)
A0QYB3: “AlphaFold monomer V2.0 prediction for xylitol-binding protein (A0QYB3)”. 1 pocket (best druggability 0.67). MolNFT v1 #502583 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- A0QYB3
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2A40776e144333aa14A6Da9D7a7a28806d8c1007
- Molecule
- Xylitol-binding protein
- UniProt
- A0QYB3
- Pockets
- 1 · best druggability 0.67
Structure
1 distinct chain · 44% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylitol-binding protein | protein | 349 | 44% helix, 17% strand | A0QYB3 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.67 | 0.94 | 23 | empty |
Compared structures
- 4RS3 · Crystal structure of carbohydrate transporter A0QYB3 from Mycobacterium smegmatis str.… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 4RS3 · Crystal structure of carbohydrate transporter A0QYB3 from mycobacterium smegmatis str.… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 5HKO · Crystal structure of ABC transporter Solute Binding Protein MSMEG_3598 from Mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.90
- 5HKO · Crystal structure of ABC transporter solute binding protein MSMEG_3598 from mycobacterium… · an experimental structure of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0QYB3
- Elsewhere: UniProt A0QYB3 · AlphaFold DB A0QYB3
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