MolNFT v1 · #502513 · protein
AlphaFold monomer V2.0 prediction for beta-xylosidase (Q9ZFM2)
Q9ZFM2: “AlphaFold monomer V2.0 prediction for beta-xylosidase (Q9ZFM2)”. 3 pockets (best druggability 0.53). MolNFT v1 #502513 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q9ZFM2
- Type
- protein
- Length
- 504 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Beta-xylosidase
- UniProt
- Q9ZFM2
- Pockets
- 3 · best druggability 0.53
Structure
1 distinct chain · 33% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-xylosidase | protein | 504 | 33% helix, 27% strand | Q9ZFM2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 199 | 0.53 | 0.78 | 30 | empty |
| 2 | 227 | 0.48 | 0.74 | 29 | empty |
| 3 | 56 | 0.29 | 0.74 | 18 | empty |
Compared structures
- 2BS9 · Native crystal structure of a GH39 beta-xylosidase XynB1 from Geobacillus… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2BS9 · Native crystal structure of a GH39 beta-xylosidase XYNB1 from geobacillus… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1W91 · Crystal structure of 1,4-beta-D-xylan xylohydrolase solve using anomalous signal from… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1W91 · crystal structure of 1,4-BETA-D-XYLAN XYLOHYDROLASE solve using anomalous signal from… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2BFG · crystal structure of beta-xylosidase (fam GH39) in complex with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2BFG · Crystal structure of beta-xylosidase (fam GH39) in complex with… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZFM2
- Elsewhere: UniProt Q9ZFM2 · AlphaFold DB Q9ZFM2
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