MolNFT v1 · #502508 · protein
AlphaFold monomer V2.0 prediction for beta-xylosidase (P94489)
P94489: “AlphaFold monomer V2.0 prediction for beta-xylosidase (P94489)”. 5 pockets (best druggability 0.65). MolNFT v1 #502508 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P94489
- Type
- protein
- Length
- 533 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa178cE677748B9f80A2a9921a7edc5C39EDB037A
- Molecule
- Beta-xylosidase
- UniProt
- P94489
- Pockets
- 5 · best druggability 0.65
Structure
1 distinct chain · 1% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-xylosidase | protein | 533 | 1% helix, 47% strand | P94489 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 283 | 0.65 | 0.81 | 25 | empty |
| 2 | 138 | 0.58 | 0.83 | 24 | empty |
| 3 | 240 | 0.57 | 0.78 | 26 | empty |
| 4 | 129 | 0.44 | 0.77 | 22 | empty |
| 5 | 84 | 0.34 | 0.75 | 19 | empty |
Compared structures
- 1YIF · CRYSTAL STRUCTURE OF beta-1,4-xylosidase FROM BACILLUS SUBTILIS, NEW YORK STRUCTURAL… · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1YIF · Crystal structure of beta-1,4-xylosidase from bacillus subtilis, new york structural… · an experimental structure of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P94489
- Elsewhere: UniProt P94489 · AlphaFold DB P94489
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