MolNFT v1 · #502496 · protein
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (Q60037)
Q60037: “AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (Q60037)”. 6 pockets (best druggability 0.75). MolNFT v1 #502496 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q60037
- Type
- protein
- Length
- 1,059 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5548CBD0056D8b2CE423c442c9ED70e67Bed2558
- Molecule
- Endo-1,4-beta-xylanase a
- UniProt
- Q60037
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 15% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase a | protein | 1059 | 15% helix, 39% strand | Q60037 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1074 | 0.75 | 0.77 | 98 | empty |
| 2 | 441 | 0.72 | 0.82 | 42 | empty |
| 3 | 366 | 0.60 | 0.77 | 33 | empty |
| 4 | 73 | 0.38 | 0.78 | 14 | empty |
| 5 | 92 | 0.35 | 0.74 | 17 | empty |
Compared structures
- 1I8A · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A with glucose · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 1I8A · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A with glucose · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 1I8U · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 1I8U · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 1I82 · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A with cellobiose · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 1I82 · Family 9 carbohydrate-binding module from thermotoga maritima xylanase 10A with cellobiose · an experimental structure of the same protein · chain A against A, TM-score 0.18
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q60037
- Elsewhere: UniProt Q60037 · AlphaFold DB Q60037
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