MolNFT v1 · #502491 · protein
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (B4XVN1)
B4XVN1: “AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (B4XVN1)”. 3 pockets (best druggability 0.47). MolNFT v1 #502491 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- B4XVN1
- Type
- protein
- Length
- 464 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x81F3F163c1FaF6e4c4c9c3437AD70f2b580f2212
- Molecule
- Endo-1,4-beta-xylanase a
- UniProt
- B4XVN1
- Pockets
- 3 · best druggability 0.47
Structure
1 distinct chain · 29% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase a | protein | 464 | 29% helix, 26% strand | B4XVN1 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 147 | 0.47 | 0.77 | 28 | empty |
| 2 | 147 | 0.38 | 0.73 | 26 | empty |
| 3 | 121 | 0.35 | 0.73 | 25 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3WUF · The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) from Streptomyces sp. 9 · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUF · The mutant crystal structure of B-1,4-xylanase (XYNAS9_V43P/G44E) from streptomyces sp. 9 · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUB · The wild type crystal structure of B-1,4-xylanase (XYNAS9) from streptomyces sp. 9 · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUB · The wild type crystal structure of b-1,4-Xylanase (XynAS9) from Streptomyces sp. 9 · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUE · The wild type crystal structure of B-1,4-xylanase (XYNAS9) with xylobiose from… · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUE · The wild type crystal structure of b-1,4-Xylanase (XynAS9) with xylobiose from… · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUG · The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) with xylobiose from… · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3WUG · The mutant crystal structure of B-1,4-xylanase (XYNAS9_V43P/G44E) with xylobiose from… · an experimental structure of the same protein · chain A against A, TM-score 0.67
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4XVN1
- Elsewhere: UniProt B4XVN1 · AlphaFold DB B4XVN1
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