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MolNFT v1 · #502456 · protein

AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P55329)

P55329: “AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P55329)”. 1 pocket (best druggability 0.50). MolNFT v1 #502456 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

Accession
P55329
Type
protein
Length
211 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x98c95d7EC463682453dDA6620Db0cecEae0560fA
Molecule
Endo-1,4-beta-xylanase a
UniProt
P55329
Pockets
1 · best druggability 0.50

Structure

1 distinct chain · 7% helix, 54% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEndo-1,4-beta-xylanase aprotein2117% helix, 54% strandP55329

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12200.500.7525empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 6QE8 · Crystal structure of aspergillus niger GH11 endoxylanase xyna in complex with xylobiose… · an experimental structure of the same protein · chain A against A, TM-score 0.87
  • 6QE8 · Crystal structure of Aspergillus niger GH11 endoxylanase XynA in complex with xylobiose… · an experimental structure of the same protein · chain A against A, TM-score 0.87
  • 2QZ2 · Crystal structure of a glycoside hydrolase family 11 xylanase from aspergillus niger in… · an experimental structure of the same protein · chain A against A, TM-score 0.86
  • 2QZ2 · Crystal structure of a glycoside hydrolase family 11 xylanase from Aspergillus niger in… · an experimental structure of the same protein · chain A against A, TM-score 0.86
  • 1UKR · Structure of endo-1,4-beta-xylanase C · an experimental structure of the same protein · chain A against A, TM-score 0.86
  • 1UKR · Structure of endo-1,4-beta-xylanase C · an experimental structure of the same protein · chain A against A, TM-score 0.86
  • 1T6G · Crystal structure of the Triticum aestivum xylanase inhibitor-I in complex with… · an experimental structure of the same protein · chain A against C, TM-score 0.85
  • 1T6G · Crystal structure of the triticum aestivum xylanase inhibitor-I in complex with… · an experimental structure of the same protein · chain A against C, TM-score 0.85

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