MolNFT v1 · #502448 · protein
AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P07528)
P07528: “AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase a (P07528)”. 3 pockets (best druggability 0.72). MolNFT v1 #502448 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P07528
- Type
- protein
- Length
- 396 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6d550761034d809D2162B175722cf896575846D6
- Molecule
- Endo-1,4-beta-xylanase a
- UniProt
- P07528
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 40% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase a | protein | 396 | 40% helix, 16% strand | P07528 |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.72 | 0.98 | 19 | empty |
| 2 | 175 | 0.55 | 0.80 | 29 | empty |
| 3 | 131 | 0.51 | 0.80 | 22 | empty |
Compared structures
- 7CPL · Xylanase R from bacillus sp. tar-1 · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 7CPL · Xylanase R from Bacillus sp. TAR-1 · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 7CPK · Xylanase R from Bacillus sp. TAR-1 · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 7CPK · Xylanase R from bacillus sp. tar-1 · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 8Y1M · Xylanase R from Bacillus sp. TAR-1 complexed with xylobiose. · an experimental structure of the same protein · chain A against A, TM-score 0.88
- 8XY0 · Activity-stability trade-off observed in variants at position 315 of the GH10 xylanase… · an experimental structure of the same protein · chain A against A, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07528
- Elsewhere: UniProt P07528 · AlphaFold DB P07528
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.