MolNFT v1 · #502374 · protein
AlphaFold monomer V2.0 prediction for alpha-xylosidase (P31434)
P31434: “AlphaFold monomer V2.0 prediction for alpha-xylosidase (P31434)”. 6 pockets (best druggability 0.45). MolNFT v1 #502374 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P31434
- Type
- protein
- Length
- 772 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x025f3b1a898b05AD2731bE6Ab72687b5920c4A3F
- Molecule
- Alpha-xylosidase
- UniProt
- P31434
- Pockets
- 6 · best druggability 0.45
Structure
1 distinct chain · 22% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alpha-xylosidase | protein | 772 | 22% helix, 34% strand | P31434 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 177 | 0.45 | 0.75 | 33 | empty |
| 2 | 60 | 0.40 | 0.81 | 18 | empty |
| 3 | 67 | 0.39 | 0.79 | 24 | empty |
| 4 | 61 | 0.33 | 0.76 | 19 | empty |
| 5 | 76 | 0.31 | 0.73 | 17 | empty |
Compared structures
- 1XSJ · Structure of a family 31 alpha glycosidase · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XSJ · Structure of a Family 31 alpha glycosidase · an experimental structure of the same protein · chain A against A, TM-score 1.00
- 1XSI · Structure of a Family 31 alpha glycosidase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1XSI · Structure of a family 31 alpha glycosidase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1XSK · Structure of a Family 31 alpha glycosidase glycosyl-enzyme intermediate · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1XSK · Structure of a family 31 alpha glycosidase glycosyl-enzyme intermediate · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2F2H · Structure of the yici thiosugar michaelis complex · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 2F2H · Structure of the YicI thiosugar Michaelis complex · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WE5 · Crystal structure of alpha-xylosidase from escherichia COLI · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 1WE5 · Crystal Structure of Alpha-Xylosidase from Escherichia coli · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31434
- Elsewhere: UniProt P31434 · AlphaFold DB P31434
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